Scientific publications and other output
PUBLICATIONS
Scientific Publications 2024 & Online Early
Moersberger H, Valdez JW, Martin JG, Junker J, Georgieva I, Bauer S, ... Capinha C, McCallum I, Pereira HM, Bonn A (Online early). Biodiversity monitoring in Europe: user and policy needs. Conservation Letters.
Capinha C, Ceia-Hasse A, de-Miguel S, Vila-Vicosa C, Porto M, Jaric I, Tiago P, Fernandez N, Valdez J, McCallum I, and Pereira HM (Online early). Using citizen science data for predicting the timing of ecological phenomena across regions. BioScience.
Castro A, Pinto J, Reino L, Pipek P, Capinha C (2024). Large language models overcome the challenges of unstructured text data in ecology. Ecological Informatics. 82: 102742.
Liu D, Essl F, Lenzner B, Moser D, Semenchuk P, Blackburn TM, Cassey P, Biancolini D, Capinha C, ... Dullinger, S. (2024). Regional invasion history and land use shape the prevalence of non‐native species in local assemblages. Global Change Biology, 30(7), e17426.
Nerozzi I, Soto I, Vimercati G, Capinha C, Tarkan AS, Kraus F, Haubrock PJ, Pauwels OSG, Zuffi MAL, Balzani P (Online early). Potential distribution, observed impacts, and invasion risk of two non-native snapping turtles, Chelydra serpentina and Macrochelys temminckii. Biological Invasions.
Diogo I, Sillero N, Capinha C (2024) Predicting the risk of invasion by broadleaf watermilfoil (Myriophyllum heterophyllum) in mainland Portugal. Heliyon, 10(13).
Heringer G, Fernandez RD, Bang A, Cordonnier M, Novoa A, Lenzner B, Capinha C, ... & Courchamp, F. (2024). Economic costs of invasive non-native species in urban areas: An underexplored financial drain. Science of The Total Environment, 170336.
Fernandes R, Geraldes M, Marchante E, Durán J, Capinha C (2024). Recent land use and land cover pressures on Iberian peatlands. Ecological Indicators. 158: 111412. [research highlight]
Schertler A, Lenzner B, Dullinger S, Moser D, Bufford JL, Ghelardini L, Santini A, Capinha C... & Essl, F. (2024). Biogeography and global flows of 100 major alien fungal and fungus‐like oomycete pathogens. Journal of Biogeography.
Essl F, García‐Rodríguez A, Lenzner B, Alexander JM, Capinha C, Gaüzère P, ... & Dullinger S (2024) Potential sources of time lags in calibrating species distribution models. Journal of Biogeography, 51.
Scientific Publications 2023
Ceia‐Hasse A, Thomson MA, Noguera‐Urbano EA, Carrillo‐Restrepo JC, Cruz‐Rodríguez CA, Correa‐Ayram CA, ... & Rosa, I. M. D. (2023). Primate extinction, the legacy of 40 years' road expansion in Colombia. Animal Conservation.
Zamora-Marín JM, Ruiz-Navarro A, Oficialdegui FJ, Anastácio PM, Miranda R, García-Murillo P, ... Oliva-Paterna FJ (2023) A multi-taxa assessment of aquatic non-indigenous species introduced into Iberian freshwater and transitional waters. NeoBiota, 89, 17-44.
Oliveira S, Capinha C, Rocha J (2023) Predicting the time of arrival of the Tiger mosquito (Aedes albopictus) to new countries based on trade patterns of tyres and plants. Journal of Applied Ecology. 60.
Ceia-Hasse A, Sousa CA, Gouveia BR, Capinha C (2023) Forecasting the abundance of disease vectors with deep learning. Ecological Informatics, 102272.
Monteiro M, Capinha C, Ferreira MT, Nuñez MA, Reino L (2023) Negative and positive impacts of alien macrofungi: a global scale database (2023) Negative and positive impacts of alien macrofungi: a global scale database. NeoBiota, 85: 23-42.
Chen G, Gu X, Capinha C, Lee SY, Cui B, Yang, F, ... Wang W (2023). Large‐scale changes in macrobenthic biodiversity driven by mangrove afforestation. Journal of Applied Ecology, 60.
Capinha C, Essl F, Porto M, Seebens H (2023). The worldwide networks of spread of recorded alien species. Proceedings of the National Academy of Sciences (PNAS), 120: e2201911120. [research highlight]
Castro A, Ribeiro J, Reino L, Capinha C (2023). Who is reporting non-native species and how? A cross-expert assessment of practices and drivers of non-native biodiversity reporting in species regional listing. Ecology and Evolution, 13: e10148. [research highlight]
Liu D, Semenchuk P, Essl F, Lenzner B, Moser D, Blackburn TM, Cassey P, Biancolini D, Capinha C, ... & Dullinger, S. (2023). The impact of land use on non-native species incidence and number in local assemblages worldwide. Nature Communications, 14: 2090.
Oficialdegui FJ, Zamora-Marín JM, Guareschi S, Anastácio PM, García-Murillo P, Ribeiro F, ... Capinha C ... & Oliva-Paterna FJ (2023) A horizon scan exercise for aquatic invasive alien species in Iberian inland waters. Science of The Total Environment, 161798.
Scientific Publications 2024 & Online Early
Moersberger H, Valdez JW, Martin JG, Junker J, Georgieva I, Bauer S, ... Capinha C, McCallum I, Pereira HM, Bonn A (Online early). Biodiversity monitoring in Europe: user and policy needs. Conservation Letters.
Capinha C, Ceia-Hasse A, de-Miguel S, Vila-Vicosa C, Porto M, Jaric I, Tiago P, Fernandez N, Valdez J, McCallum I, and Pereira HM (Online early). Using citizen science data for predicting the timing of ecological phenomena across regions. BioScience.
Castro A, Pinto J, Reino L, Pipek P, Capinha C (2024). Large language models overcome the challenges of unstructured text data in ecology. Ecological Informatics. 82: 102742.
Liu D, Essl F, Lenzner B, Moser D, Semenchuk P, Blackburn TM, Cassey P, Biancolini D, Capinha C, ... Dullinger, S. (2024). Regional invasion history and land use shape the prevalence of non‐native species in local assemblages. Global Change Biology, 30(7), e17426.
Nerozzi I, Soto I, Vimercati G, Capinha C, Tarkan AS, Kraus F, Haubrock PJ, Pauwels OSG, Zuffi MAL, Balzani P (Online early). Potential distribution, observed impacts, and invasion risk of two non-native snapping turtles, Chelydra serpentina and Macrochelys temminckii. Biological Invasions.
Diogo I, Sillero N, Capinha C (2024) Predicting the risk of invasion by broadleaf watermilfoil (Myriophyllum heterophyllum) in mainland Portugal. Heliyon, 10(13).
Heringer G, Fernandez RD, Bang A, Cordonnier M, Novoa A, Lenzner B, Capinha C, ... & Courchamp, F. (2024). Economic costs of invasive non-native species in urban areas: An underexplored financial drain. Science of The Total Environment, 170336.
Fernandes R, Geraldes M, Marchante E, Durán J, Capinha C (2024). Recent land use and land cover pressures on Iberian peatlands. Ecological Indicators. 158: 111412. [research highlight]
Schertler A, Lenzner B, Dullinger S, Moser D, Bufford JL, Ghelardini L, Santini A, Capinha C... & Essl, F. (2024). Biogeography and global flows of 100 major alien fungal and fungus‐like oomycete pathogens. Journal of Biogeography.
Essl F, García‐Rodríguez A, Lenzner B, Alexander JM, Capinha C, Gaüzère P, ... & Dullinger S (2024) Potential sources of time lags in calibrating species distribution models. Journal of Biogeography, 51.
Scientific Publications 2023
Ceia‐Hasse A, Thomson MA, Noguera‐Urbano EA, Carrillo‐Restrepo JC, Cruz‐Rodríguez CA, Correa‐Ayram CA, ... & Rosa, I. M. D. (2023). Primate extinction, the legacy of 40 years' road expansion in Colombia. Animal Conservation.
Zamora-Marín JM, Ruiz-Navarro A, Oficialdegui FJ, Anastácio PM, Miranda R, García-Murillo P, ... Oliva-Paterna FJ (2023) A multi-taxa assessment of aquatic non-indigenous species introduced into Iberian freshwater and transitional waters. NeoBiota, 89, 17-44.
Oliveira S, Capinha C, Rocha J (2023) Predicting the time of arrival of the Tiger mosquito (Aedes albopictus) to new countries based on trade patterns of tyres and plants. Journal of Applied Ecology. 60.
Ceia-Hasse A, Sousa CA, Gouveia BR, Capinha C (2023) Forecasting the abundance of disease vectors with deep learning. Ecological Informatics, 102272.
Monteiro M, Capinha C, Ferreira MT, Nuñez MA, Reino L (2023) Negative and positive impacts of alien macrofungi: a global scale database (2023) Negative and positive impacts of alien macrofungi: a global scale database. NeoBiota, 85: 23-42.
Chen G, Gu X, Capinha C, Lee SY, Cui B, Yang, F, ... Wang W (2023). Large‐scale changes in macrobenthic biodiversity driven by mangrove afforestation. Journal of Applied Ecology, 60.
Capinha C, Essl F, Porto M, Seebens H (2023). The worldwide networks of spread of recorded alien species. Proceedings of the National Academy of Sciences (PNAS), 120: e2201911120. [research highlight]
Castro A, Ribeiro J, Reino L, Capinha C (2023). Who is reporting non-native species and how? A cross-expert assessment of practices and drivers of non-native biodiversity reporting in species regional listing. Ecology and Evolution, 13: e10148. [research highlight]
Liu D, Semenchuk P, Essl F, Lenzner B, Moser D, Blackburn TM, Cassey P, Biancolini D, Capinha C, ... & Dullinger, S. (2023). The impact of land use on non-native species incidence and number in local assemblages worldwide. Nature Communications, 14: 2090.
Oficialdegui FJ, Zamora-Marín JM, Guareschi S, Anastácio PM, García-Murillo P, Ribeiro F, ... Capinha C ... & Oliva-Paterna FJ (2023) A horizon scan exercise for aquatic invasive alien species in Iberian inland waters. Science of The Total Environment, 161798.
Scientific Publications 2022
Monteiro M, Reino L, Ferreira MT, Essl F, Schertler A, Capinha C (2022). Patterns and drivers of the global diversity of non‐native macrofungi. Diversity and Distributions, 28: 2042–2055. [research highlight] [Editor's choice]
Ribeiro J, Bingre P, Strubbe D, Santana J, Capinha C, Araújo MB, Reino L (2022) Exploring the Effects of Geo-political Shifts on Global Wildlife Trade. BioScience, 6: 560–572.
Naimi B, Capinha C, Ribeiro J, Rahbek C, Stubbe D, Reino L, Araújo MB (2022) Potential for invasion of traded birds under climate and land-cover change. Global Change Biology, 28: 5654-5666.
Soto I, Cuthbert RN, Kouba A, Capinha C, Turbelin A, Hudgins EJ, ... & Haubrock, PJ (2022). Global economic costs of herpetofauna invasions. Scientific Reports, 12: 10829. [See coverage in The Conversation]
Santos JM, Capinha C, Rocha J, Sousa CA (2022). The current and future distribution of the yellow fever mosquito (Aedes aegypti) on Madeira Island. PLOS Neglected Tropical Diseases, 16: e0010715.
Bergamin R, Ascensão F, Capinha C, Bastazini V, Andrade B, Boldrini I, ... & Overbeck G (2022) Native and alien grassland diversity respond differently to environmental and anthropogenic drivers across spatial scales. Journal of Vegetation Science, e13133.
Rousseau J, Castro A, Novo T, Maia C (2022) Dipylidium caninum in the twenty-first century: epidemiological studies and reported cases in companion animals and humans. Parasites and Vectors,15: 131.
Pabst R, Dias F, Borda-de-Água L, Rodríguez-González P, Capinha C (2022) Assessing and predicting the distribution of riparian invasive plants in continental Portugal. Frontiers in Ecology and Evolution, 369. [pdf]
Renault D, Angulo E, Cuthbert RN, Haubrock PJ, Capinha C, Bang A, ... & Courchamp F. (2022) The magnitude, diversity, and distribution of the economic costs of invasive terrestrial invertebrates worldwide. Science of The Total Environment, 155391.
Tedeschi L, Biancolini D, Capinha C, Rondinini C, Essl F. (2022) Introduction, spread, and impacts of invasive alien mammal species in Europe Mammal Review, 52: 252-266.
[Dissemination]
Capinha C, Sousa (2022) This little Asian tiger is an invader that is already in Portugal. Wilder [Online document] [in Portuguese]
Ribeiro J, Bingre P, Strubbe D, Santana J, Capinha C, Araújo MB, Reino L (2022) Exploring the Effects of Geo-political Shifts on Global Wildlife Trade. BioScience, 6: 560–572.
Naimi B, Capinha C, Ribeiro J, Rahbek C, Stubbe D, Reino L, Araújo MB (2022) Potential for invasion of traded birds under climate and land-cover change. Global Change Biology, 28: 5654-5666.
Soto I, Cuthbert RN, Kouba A, Capinha C, Turbelin A, Hudgins EJ, ... & Haubrock, PJ (2022). Global economic costs of herpetofauna invasions. Scientific Reports, 12: 10829. [See coverage in The Conversation]
Santos JM, Capinha C, Rocha J, Sousa CA (2022). The current and future distribution of the yellow fever mosquito (Aedes aegypti) on Madeira Island. PLOS Neglected Tropical Diseases, 16: e0010715.
Bergamin R, Ascensão F, Capinha C, Bastazini V, Andrade B, Boldrini I, ... & Overbeck G (2022) Native and alien grassland diversity respond differently to environmental and anthropogenic drivers across spatial scales. Journal of Vegetation Science, e13133.
Rousseau J, Castro A, Novo T, Maia C (2022) Dipylidium caninum in the twenty-first century: epidemiological studies and reported cases in companion animals and humans. Parasites and Vectors,15: 131.
Pabst R, Dias F, Borda-de-Água L, Rodríguez-González P, Capinha C (2022) Assessing and predicting the distribution of riparian invasive plants in continental Portugal. Frontiers in Ecology and Evolution, 369. [pdf]
Renault D, Angulo E, Cuthbert RN, Haubrock PJ, Capinha C, Bang A, ... & Courchamp F. (2022) The magnitude, diversity, and distribution of the economic costs of invasive terrestrial invertebrates worldwide. Science of The Total Environment, 155391.
Tedeschi L, Biancolini D, Capinha C, Rondinini C, Essl F. (2022) Introduction, spread, and impacts of invasive alien mammal species in Europe Mammal Review, 52: 252-266.
[Dissemination]
Capinha C, Sousa (2022) This little Asian tiger is an invader that is already in Portugal. Wilder [Online document] [in Portuguese]
Scientific publications 2021
Capinha, C, Ceia-Hasse, A, Kramer, AM, & Meijer, C (2021) Deep learning for supervised classification of temporal data in ecology. Ecological Informatics, 61: 101252.
Heringer G, Angulo E, Ballesteros-Mejia L, Capinha C, Courchamp F, Diagne C [...] Zenni R (2021) The economic costs of biological invasions in Central and South America: a first regional assessment. NeoBiota, 67: 401-426.
Kourantidou M, Cuthbert RN, Haubrock PJ, Novoa A, Taylor NG, Leroy B, Capinha C, Renault D, Angulo E, Diagne C (2021) Economic costs of invasive alien species in the Mediterranean basin. NeoBiota, 67: 427–458.
Oliveira S, Rocha J, Sousa CA, & Capinha C (2021). Wide and increasing suitability for Aedes albopictus in Europe is congruent across distribution models. Scientific Reports, 11: 1-9.
Oliveira S, Capinha C, Rocha J (2021) Automated cleansing and harmonization of international trade data. MethodsX, 8: 101567.
Ascensão, F, D’Amico, M, Martins, RC, Rebelo, R, Barbosa, AM, Bencatel, J, ... & Capinha, C (2021). Distribution of alien tetrapods in the Iberian Peninsula. NeoBiota, 64: 1-21.
Angulo, E, Diagne, C, Ballesteros-Mejia, L, Adamjy, T, Ahmed, DA, Akulov, E, Banerjeee, A, Capinha, C, ... & Courchamp, F (2021) Non-English languages enrich scientific knowledge: The example of economic costs of biological invasions. Science of The Total Environment, 144441.
Haubrock PJ, Turbelin AJ, Cuthbert RN, Novoa A, Taylor NG, Angulo E, Ballesteros-Mejia L, Bodey TW, Capinha C [...] Diagne C (2021) Economic costs of invasive alien species across Europe. NeoBiota, 67: 153–190.
Cuthbert, RN, Pattison, Z, Taylor, NG, Verbrugge, L, Diagne, C, Ahmed, DA, ... & Courchamp, F (2021) Global economic costs of aquatic invasive alien species. Science of the Total Environment, 145238.
Paganelli D, Reino L, Capinha C & Ribeiro J (2021). Exploring expert perception of protected areas’ vulnerability to biological invasions. Journal for Nature Conservation, 62: 126008.
Seebens H, Bacher S, Blackburn TM, Capinha C, Dawson W, Dullinger S, [...] Essl F (2021). Projecting the continental accumulation of alien species through to 2050. Global Change Biology. 21: 970-982.
Heringer G, Angulo E, Ballesteros-Mejia L, Capinha C, Courchamp F, Diagne C [...] Zenni R (2021) The economic costs of biological invasions in Central and South America: a first regional assessment. NeoBiota, 67: 401-426.
Kourantidou M, Cuthbert RN, Haubrock PJ, Novoa A, Taylor NG, Leroy B, Capinha C, Renault D, Angulo E, Diagne C (2021) Economic costs of invasive alien species in the Mediterranean basin. NeoBiota, 67: 427–458.
Oliveira S, Rocha J, Sousa CA, & Capinha C (2021). Wide and increasing suitability for Aedes albopictus in Europe is congruent across distribution models. Scientific Reports, 11: 1-9.
Oliveira S, Capinha C, Rocha J (2021) Automated cleansing and harmonization of international trade data. MethodsX, 8: 101567.
Ascensão, F, D’Amico, M, Martins, RC, Rebelo, R, Barbosa, AM, Bencatel, J, ... & Capinha, C (2021). Distribution of alien tetrapods in the Iberian Peninsula. NeoBiota, 64: 1-21.
Angulo, E, Diagne, C, Ballesteros-Mejia, L, Adamjy, T, Ahmed, DA, Akulov, E, Banerjeee, A, Capinha, C, ... & Courchamp, F (2021) Non-English languages enrich scientific knowledge: The example of economic costs of biological invasions. Science of The Total Environment, 144441.
Haubrock PJ, Turbelin AJ, Cuthbert RN, Novoa A, Taylor NG, Angulo E, Ballesteros-Mejia L, Bodey TW, Capinha C [...] Diagne C (2021) Economic costs of invasive alien species across Europe. NeoBiota, 67: 153–190.
Cuthbert, RN, Pattison, Z, Taylor, NG, Verbrugge, L, Diagne, C, Ahmed, DA, ... & Courchamp, F (2021) Global economic costs of aquatic invasive alien species. Science of the Total Environment, 145238.
Paganelli D, Reino L, Capinha C & Ribeiro J (2021). Exploring expert perception of protected areas’ vulnerability to biological invasions. Journal for Nature Conservation, 62: 126008.
Seebens H, Bacher S, Blackburn TM, Capinha C, Dawson W, Dullinger S, [...] Essl F (2021). Projecting the continental accumulation of alien species through to 2050. Global Change Biology. 21: 970-982.
